Transmembrane receptor-like protein
Organism: Oikopleura dioica
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q8WPM5
Pfam Acc: PF00002
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 22.0 Å
Number of TM segments = 8
Sequence positions:
: 931-944|949-989|991-1020|1023-1031|1033-1041|1046-1054|1066-1076|1104-1113
Tilt angles:
- Segment: 931-944 - Tilt: 53.8°
- Segment: 949-989 - Tilt: 55.8°
- Segment: 991-1020 - Tilt: 56.3°
- Segment: 1023-1031 - Tilt: 44.4°
- Segment: 1033-1041 - Tilt: 40.6°
- Segment: 1046-1054 - Tilt: 17.3°
- Segment: 1066-1076 - Tilt: 18.0°
- Segment: 1104-1113 - Tilt: 7.2°
Structural assessment:
MAIDEN score = 54.9942
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]