Probable transmembrane protein
Organism: Clostridium perfringens
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q8XKW0
Pfam Acc: PF07690
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 33.0 Å
Number of TM segments = 11
Sequence positions:
: 55-80|82-101|114-138|145-167|173-193|256-284|295-317|323-346|351-376|385-408|435-455
Tilt angles:
- Segment: 55-80 - Tilt: 30.8°
- Segment: 82-101 - Tilt: 6.9°
- Segment: 114-138 - Tilt: 27.9°
- Segment: 145-167 - Tilt: 7.1°
- Segment: 173-193 - Tilt: 13.7°
- Segment: 256-284 - Tilt: 41.7°
- Segment: 295-317 - Tilt: 17.0°
- Segment: 323-346 - Tilt: 5.1°
- Segment: 351-376 - Tilt: 33.3°
- Segment: 385-408 - Tilt: 12.2°
- Segment: 435-455 - Tilt: 10.1°
Structural assessment:
MAIDEN score = -89.7173
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]