Probable nitrite/nitrate transporter transmembrane protein
Organism: Ralstonia solanacearum
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q8XR86
Pfam Acc: PF07690
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 33.6 Å
Number of TM segments = 10
Sequence positions:
: 20-48|129-149|154-176|212-238|249-272|284-306|311-334|340-368|396-420|430-451
Tilt angles:
- Segment: 20-48 - Tilt: 39.7°
- Segment: 129-149 - Tilt: 24.6°
- Segment: 154-176 - Tilt: 21.8°
- Segment: 212-238 - Tilt: 45.4°
- Segment: 249-272 - Tilt: 36.0°
- Segment: 284-306 - Tilt: 15.6°
- Segment: 311-334 - Tilt: 28.2°
- Segment: 340-368 - Tilt: 42.9°
- Segment: 396-420 - Tilt: 37.9°
- Segment: 430-451 - Tilt: 22.2°
Structural assessment:
MAIDEN score = -49.2292
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]