Putative transmembrane transport protein
Organism: Salmonella typhi
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q8Z4E1
Pfam Acc: PF07690
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 28.2 Å
Number of TM segments = 11
Sequence positions:
: 11-33|46-67|73-93|100-120|135-152|170-186|223-241|252-271|281-297|303-322|342-363
Tilt angles:
- Segment: 11-33 - Tilt: 44.9°
- Segment: 46-67 - Tilt: 39.5°
- Segment: 73-93 - Tilt: 25.9°
- Segment: 100-120 - Tilt: 46.6°
- Segment: 135-152 - Tilt: 4.7°
- Segment: 170-186 - Tilt: 31.5°
- Segment: 223-241 - Tilt: 14.3°
- Segment: 252-271 - Tilt: 20.8°
- Segment: 281-297 - Tilt: 12.7°
- Segment: 303-322 - Tilt: 21.5°
- Segment: 342-363 - Tilt: 39.9°
Structural assessment:
MAIDEN score = -29.7003
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]