Transmembrane protein 39A
Organism: Mus musculus
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q9CYC3
Pfam Acc: PF10271
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 5
Sequence positions:
: 28-36|45-84|162-182|218-237|239-245
Tilt angles:
- Segment: 28-36 - Tilt: 35.0°
- Segment: 45-84 - Tilt: 37.3°
- Segment: 162-182 - Tilt: 50.6°
- Segment: 218-237 - Tilt: 51.0°
- Segment: 239-245 - Tilt: 15.3°
Structural assessment:
MAIDEN score = 158.2452
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]