V-set and transmembrane domain-containing protein 5 precursor
Organism: Mus musculus
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q9D806
Pfam Acc: PF11465
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 4
Sequence positions:
: 39-46|50-69|71-93|109-122
Tilt angles:
- Segment: 39-46 - Tilt: 32.0°
- Segment: 50-69 - Tilt: 30.5°
- Segment: 71-93 - Tilt: 16.7°
- Segment: 109-122 - Tilt: 50.1°
Structural assessment:
MAIDEN score = 50.9578
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]