Vesicular inhibitory amino acid transporter
Organism: Homo sapiens
Model: Theoretical
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q9H598
Pfam Acc: PF01490
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 11
Sequence positions:
: 122-135|153-166|205-223|241-255|270-284|308-324|337-352|392-402|437-448|461-476|491-505
Tilt angles:
- Segment: 122-135 - Tilt: 29.8°
- Segment: 153-166 - Tilt: 11.3°
- Segment: 205-223 - Tilt: 58.1°
- Segment: 241-255 - Tilt: 34.7°
- Segment: 270-284 - Tilt: 38.1°
- Segment: 308-324 - Tilt: 50.6°
- Segment: 337-352 - Tilt: 41.4°
- Segment: 392-402 - Tilt: 20.1°
- Segment: 437-448 - Tilt: 10.8°
- Segment: 461-476 - Tilt: 44.1°
- Segment: 491-505 - Tilt: 33.7°
Structural assessment:
MAIDEN score = -12.4477
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]