Vesicular inhibitory amino acid transporter
Organism: Homo sapiens
Model: Theoretical
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q9H598
Pfam Acc: PF01490
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 11
Sequence positions:
: 123-135|152-164|208-223|242-255|270-286|307-325|339-354|392-402|434-447|461-477|490-504
Tilt angles:
- Segment: 123-135 - Tilt: 22.6°
- Segment: 152-164 - Tilt: 13.1°
- Segment: 208-223 - Tilt: 51.0°
- Segment: 242-255 - Tilt: 39.5°
- Segment: 270-286 - Tilt: 47.2°
- Segment: 307-325 - Tilt: 51.6°
- Segment: 339-354 - Tilt: 40.8°
- Segment: 392-402 - Tilt: 12.9°
- Segment: 434-447 - Tilt: 12.7°
- Segment: 461-477 - Tilt: 46.0°
- Segment: 490-504 - Tilt: 32.7°
Structural assessment:
MAIDEN score = -17.6234
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]