Vesicular inhibitory amino acid transporter
Organism: Homo sapiens
Model: Theoretical
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q9H598
Pfam Acc: PF01490
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 23.0 Å
Number of TM segments = 11
Sequence positions:
: 125-137|152-167|209-225|242-257|268-293|309-326|338-352|391-406|429-446|462-476|489-505
Tilt angles:
- Segment: 125-137 - Tilt: 12.6°
- Segment: 152-167 - Tilt: 23.7°
- Segment: 209-225 - Tilt: 19.7°
- Segment: 242-257 - Tilt: 20.3°
- Segment: 268-293 - Tilt: 57.8°
- Segment: 309-326 - Tilt: 34.9°
- Segment: 338-352 - Tilt: 28.4°
- Segment: 391-406 - Tilt: 28.8°
- Segment: 429-446 - Tilt: 39.5°
- Segment: 462-476 - Tilt: 28.0°
- Segment: 489-505 - Tilt: 27.1°
Structural assessment:
MAIDEN score = -54.4490
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]