Vesicular inhibitory amino acid transporter
Organism: Homo sapiens
Model: Theoretical
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q9H598
Pfam Acc: PF01490
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 24.9 Å
Number of TM segments = 11
Sequence positions:
: 125-142|144-160|209-225|244-258|268-286|306-322|347-362|386-406|429-444|458-476|493-509
Tilt angles:
- Segment: 125-142 - Tilt: 38.7°
- Segment: 144-160 - Tilt: 24.6°
- Segment: 209-225 - Tilt: 33.8°
- Segment: 244-258 - Tilt: 13.7°
- Segment: 268-286 - Tilt: 34.6°
- Segment: 306-322 - Tilt: 17.3°
- Segment: 347-362 - Tilt: 15.8°
- Segment: 386-406 - Tilt: 54.0°
- Segment: 429-444 - Tilt: 25.0°
- Segment: 458-476 - Tilt: 45.6°
- Segment: 493-509 - Tilt: 19.5°
Structural assessment:
MAIDEN score = -10.8185
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]