Vesicular inhibitory amino acid transporter
Organism: Homo sapiens
Model: Theoretical
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q9H598
Pfam Acc: PF01490
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 24.9 Å
Number of TM segments = 11
Sequence positions:
: 126-140|147-163|208-223|242-256|267-284|306-321|342-358|388-402|435-449|458-472|494-509
Tilt angles:
- Segment: 126-140 - Tilt: 22.0°
- Segment: 147-163 - Tilt: 7.2°
- Segment: 208-223 - Tilt: 27.3°
- Segment: 242-256 - Tilt: 12.0°
- Segment: 267-284 - Tilt: 22.1°
- Segment: 306-321 - Tilt: 34.8°
- Segment: 342-358 - Tilt: 23.5°
- Segment: 388-402 - Tilt: 27.3°
- Segment: 435-449 - Tilt: 17.9°
- Segment: 458-472 - Tilt: 16.3°
- Segment: 494-509 - Tilt: 11.5°
Structural assessment:
MAIDEN score = -37.0572
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]