Envelope glycoprotein gp160 precursor
Organism: Human immunodeficiency virus type 1 group M subtype F1
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q9QSQ7
Pfam Acc: PF00516
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 21.0 Å
Number of TM segments = 4
Sequence positions:
: 121-128|190-192|295-301|318-321
Tilt angles:
- Segment: 121-128 - Tilt: 35.7°
- Segment: 190-192 - Tilt: 11.2°
- Segment: 295-301 - Tilt: 39.6°
- Segment: 318-321 - Tilt: 61.3°
Structural assessment:
MAIDEN score = 30.5739
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]