Putative transmembrane transport protein
Organism: Bacteroides sp.
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: R5B3Z0
Pfam Acc: PF07690
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 36.6 Å
Number of TM segments = 7
Sequence positions:
: 17-44|54-78|83-102|106-133|143-166|169-190|214-239
Tilt angles:
- Segment: 17-44 - Tilt: 30.3°
- Segment: 54-78 - Tilt: 8.8°
- Segment: 83-102 - Tilt: 17.9°
- Segment: 106-133 - Tilt: 32.8°
- Segment: 143-166 - Tilt: 23.3°
- Segment: 169-190 - Tilt: 3.4°
- Segment: 214-239 - Tilt: 18.5°
Structural assessment:
MAIDEN score = -30.4886
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]