Putative transmembrane transport protein
Organism: Bacteroides sp.
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: R5B3Z0
Pfam Acc: PF07690
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 27.9 Å
Number of TM segments = 8
Sequence positions:
: 20-41|55-73|85-102|106-128|145-162|171-187|223-239|255-270
Tilt angles:
- Segment: 20-41 - Tilt: 40.0°
- Segment: 55-73 - Tilt: 12.0°
- Segment: 85-102 - Tilt: 19.7°
- Segment: 106-128 - Tilt: 43.8°
- Segment: 145-162 - Tilt: 20.5°
- Segment: 171-187 - Tilt: 14.8°
- Segment: 223-239 - Tilt: 11.6°
- Segment: 255-270 - Tilt: 11.6°
Structural assessment:
MAIDEN score = -29.8935
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]