Putative transmembrane transport protein
Organism: Bacteroides sp.
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: R5B3Z0
Pfam Acc: PF07690
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 11
Sequence positions:
: 56-70|84-97|114-133|144-155|178-189|224-236|262-271|285-299|308-322|344-363|368-380
Tilt angles:
- Segment: 56-70 - Tilt: 34.2°
- Segment: 84-97 - Tilt: 22.0°
- Segment: 114-133 - Tilt: 57.9°
- Segment: 144-155 - Tilt: 17.0°
- Segment: 178-189 - Tilt: 22.6°
- Segment: 224-236 - Tilt: 8.3°
- Segment: 262-271 - Tilt: 19.5°
- Segment: 285-299 - Tilt: 40.3°
- Segment: 308-322 - Tilt: 39.4°
- Segment: 344-363 - Tilt: 45.8°
- Segment: 368-380 - Tilt: 23.8°
Structural assessment:
MAIDEN score = -30.2001
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]