Putative transmembrane transport protein
Organism: Bacteroides sp.
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: R5B3Z0
Pfam Acc: PF07690
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 21.6 Å
Number of TM segments = 9
Sequence positions:
: 53-67|88-105|107-131|142-158|174-190|220-237|313-327|347-362|374-390
Tilt angles:
- Segment: 53-67 - Tilt: 30.7°
- Segment: 88-105 - Tilt: 49.8°
- Segment: 107-131 - Tilt: 56.0°
- Segment: 142-158 - Tilt: 34.4°
- Segment: 174-190 - Tilt: 37.7°
- Segment: 220-237 - Tilt: 38.2°
- Segment: 313-327 - Tilt: 25.1°
- Segment: 347-362 - Tilt: 28.4°
- Segment: 374-390 - Tilt: 43.7°
Structural assessment:
MAIDEN score = -4.4101
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]