Putative transmembrane transport protein
Organism: Prevotella sp.
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: R6ECT0
Pfam Acc: PF07690
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 12
Sequence positions:
: 10-27|49-63|74-86|105-120|137-149|170-182|212-226|248-258|273-286|298-311|334-349|362-376
Tilt angles:
- Segment: 10-27 - Tilt: 55.5°
- Segment: 49-63 - Tilt: 39.4°
- Segment: 74-86 - Tilt: 13.0°
- Segment: 105-120 - Tilt: 42.6°
- Segment: 137-149 - Tilt: 19.1°
- Segment: 170-182 - Tilt: 20.9°
- Segment: 212-226 - Tilt: 32.9°
- Segment: 248-258 - Tilt: 10.5°
- Segment: 273-286 - Tilt: 10.0°
- Segment: 298-311 - Tilt: 34.0°
- Segment: 334-349 - Tilt: 25.7°
- Segment: 362-376 - Tilt: 15.0°
Structural assessment:
MAIDEN score = -22.9846
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]