Putative transmembrane transport protein
Organism: Prevotella sp.
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: R6ECT0
Pfam Acc: PF07690
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 12
Sequence positions:
: 13-28|46-60|80-93|100-119|135-149|165-179|212-225|250-261|271-284|301-313|334-348|364-378
Tilt angles:
- Segment: 13-28 - Tilt: 38.8°
- Segment: 46-60 - Tilt: 19.0°
- Segment: 80-93 - Tilt: 30.9°
- Segment: 100-119 - Tilt: 56.1°
- Segment: 135-149 - Tilt: 34.8°
- Segment: 165-179 - Tilt: 8.9°
- Segment: 212-225 - Tilt: 33.0°
- Segment: 250-261 - Tilt: 28.5°
- Segment: 271-284 - Tilt: 23.5°
- Segment: 301-313 - Tilt: 10.3°
- Segment: 334-348 - Tilt: 35.9°
- Segment: 364-378 - Tilt: 26.6°
Structural assessment:
MAIDEN score = -24.0645
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]