Putative transmembrane transport protein
Organism: Prevotella sp.
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: R6QXF9
Pfam Acc: PF07690
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 33.3 Å
Number of TM segments = 11
Sequence positions:
: 13-36|48-73|76-96|107-128|137-159|162-184|201-233|245-267|270-290|297-321|330-352
Tilt angles:
- Segment: 13-36 - Tilt: 16.8°
- Segment: 48-73 - Tilt: 26.2°
- Segment: 76-96 - Tilt: 8.2°
- Segment: 107-128 - Tilt: 12.8°
- Segment: 137-159 - Tilt: 19.0°
- Segment: 162-184 - Tilt: 18.1°
- Segment: 201-233 - Tilt: 37.4°
- Segment: 245-267 - Tilt: 34.8°
- Segment: 270-290 - Tilt: 13.3°
- Segment: 297-321 - Tilt: 39.4°
- Segment: 330-352 - Tilt: 6.2°
Structural assessment:
MAIDEN score = -37.6023
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]