Putative transmembrane protein
Organism: Bacteroides fragilis
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: R6Z811
Pfam Acc: PF01988
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 5
Sequence positions:
: 12-26|39-53|65-70|88-100|112-125
Tilt angles:
- Segment: 12-26 - Tilt: 36.6°
- Segment: 39-53 - Tilt: 33.5°
- Segment: 65-70 - Tilt: 18.4°
- Segment: 88-100 - Tilt: 5.9°
- Segment: 112-125 - Tilt: 32.0°
Structural assessment:
MAIDEN score = -2.5596
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]