V-set and transmembrane domain-containing protein 4 precursor
Organism: Mus musculus
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: T1NXB5
Pfam Acc: PF07686
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 28.0 Å
Number of TM segments = 5
Sequence positions:
: 2-11|20-27|29-68|135-183|187-196
Tilt angles:
- Segment: 2-11 - Tilt: 27.7°
- Segment: 20-27 - Tilt: 14.2°
- Segment: 29-68 - Tilt: 16.9°
- Segment: 135-183 - Tilt: 32.6°
- Segment: 187-196 - Tilt: 5.2°
Structural assessment:
MAIDEN score = 163.5637
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]