Cytochrome c biogenesis protein transmembrane region
Organism: Gloeobacter kilaueensis
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: U5QE57
Pfam Acc: PF11412
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 9
Sequence positions:
: 311-325|342-356|377-396|410-431|447-461|475-486|495-506|517-536|543-559
Tilt angles:
- Segment: 311-325 - Tilt: 33.3°
- Segment: 342-356 - Tilt: 36.2°
- Segment: 377-396 - Tilt: 41.8°
- Segment: 410-431 - Tilt: 51.1°
- Segment: 447-461 - Tilt: 42.3°
- Segment: 475-486 - Tilt: 34.3°
- Segment: 495-506 - Tilt: 36.3°
- Segment: 517-536 - Tilt: 40.7°
- Segment: 543-559 - Tilt: 48.3°
Structural assessment:
MAIDEN score = -27.3996
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]