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Cytochrome c biogenesis protein transmembrane region

Organism: Gemmatirosa kalamazoonesis
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical

UniProtKB AC: W0RLQ4
Pfam Acc: PF02683


Membrane assignment:

Output PDB file Download

Hydrophobic thickness = 24.9 Å

Number of TM segments = 5

Sequence positions:
: 31-51|96-113|116-144|171-193|198-215

Tilt angles:
- Segment: 31-51 - Tilt: 46.5°
- Segment: 96-113 - Tilt: 45.9°
- Segment: 116-144 - Tilt: 22.6°
- Segment: 171-193 - Tilt: 28.8°
- Segment: 198-215 - Tilt: 18.9°


Structural assessment:

MAIDEN score = -8.8974
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.


Scores for all residue pairs Download




[creation date: Sep-08-2016]