Malonyl-CoA decarboxylase, mitochondrial (MLYCD)

The protein contains 493 amino acids for an estimated molecular weight of 55003 Da.

 

Catalyzes the conversion of malonyl-CoA to acetyl-CoA. In the fatty acid biosynthesis MCD selectively removes malonyl-CoA and thus assures that methyl-malonyl-CoA is the only chain elongating substrate for fatty acid synthase and that fatty acids with multiple methyl side chains are produced. In peroxisomes it may be involved in degrading intraperoxisomal malonyl-CoA, which is generated by the peroxisomal beta-oxidation of odd chain-length dicarboxylic fatty acids. Plays a role in the metabolic balance between glucose and lipid oxidation in muscle independent of alterations in insulin signaling. May play a role in controlling the extent of ischemic injury by promoting glucose oxidation. (updated: Oct. 10, 2018)

Protein identification was indicated in the following studies:

  1. Bryk and co-workers. (2017) Quantitative Analysis of Human Red Blood Cell Proteome. J Proteome Res. 16(8), 2752-2761.

Methods

The following articles were analysed to gather the proteome content of erythrocytes.

The gene or protein list provided in the studies were processed using the ID mapping API of Uniprot in September 2018. The number of proteins identified and mapped without ambiguity in these studies is indicated below.
Only Swiss-Prot entries (reviewed) were considered for protein evidence assignation.

PublicationIdentification 1Uniprot mapping 2Not mapped /
Obsolete
TrEMBLSwiss-Prot
Goodman (2013)2289 (gene list)227853205992269
Lange (2014)123412347281224
Hegedus (2015)2638262202352387
Wilson (2016)165815281702911068
d'Alessandro (2017)18261817201815
Bryk (2017)20902060101081942
Chu (2018)18531804553621387

1 as available in the article and/or in supplementary material
2 uniprot mapping returns all protein isoforms as one entry

The compilation of older studies can be retrieved from the Red Blood Cell Collection database.

The data and differentiation stages presented below come from the proteomic study and analysis performed by our partners of the GReX consortium, more details are available in their published work.

No sequence conservation computed yet.

Interpro domains
Total structural coverage: 94%
Model score: 100
No model available.

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No binding partner found

The reference OMIM entry for this protein is 248360

Malonyl-coa decarboxylase deficiency

A number sign (#) is used with this entry because the disorder is caused by mutation in the malonyl-CoA decarboxylase gene (MLYCD; 606761), which maps to chromosome 16q.

DESCRIPTION

Malonyl-CoA decarboxylase deficiency is an uncommon inherited metabolic disease. The characteristic phenotype is variable, but may include developmental delay in early childhood, seizures, hypotonia, diarrhea, vomiting, metabolic acidosis, hypoglycemia, ketosis, abnormal urinary compounds, lactic acidemia, and hypertrophic cardiomyopathy (Sweetman and Williams, 2001).

CLINICAL FEATURES

Brown et al. (1984) described deficiency of malonyl-CoA decarboxylase in a 5-year-old boy who had been studied for short stature, abdominal pain, chronic constipation, episodic vomiting, and metabolic acidosis. Abnormal amounts of malonic, methylmalonic, and succinic acids were found in his urine. The parents were first cousins, and a sib had died at 3.5 months of age. The mitochondrial malonyl-CoA decarboxylase was very deficient and both parents had an intermediate level of activity. Haan et al. (1986) reported a second boy with more severe malonyl-CoA decarboxylase deficiency who presented in a quite different way from the previous patient and whose urine contained, in addition to the above-mentioned organic acids, adipic, glutaric, and suberic acids. The child was mildly mentally retarded and presented with vomiting, seizures, hypoglycemia, and mild metabolic acidosis during a urinary tract infection. Mitochondrial malonyl-CoA decarboxylase activity in fibroblasts was 4% of normal; in both parents it was about half normal. MacPhee et al. (1993) described 2 patients, a son of second-cousin Irish parents and a girl, the daughter of first-cousin Scottish parents. They were investigated during episodes of vomiting and febrile convulsions associated with concomitant developmental delay. Malonicaciduria and grossly reduced malonyl-CoA decarboxylase activity were demonstrated. FitzPatrick et al. (1999) provided an analysis of the 7 reported cases of MCD deficiency. The condition was present in early childhood and was associated with malonicaciduria (7 of 7), methylmalonicaciduria (7 of 7), developmental delay (7 of 7), seizure disorder (4 of 7), hypoglycemia (4 of 7), and cardiomyopathy (2 of 7). De Wit et al. (2006) reported a 4.5-year-old girl, born of consanguineous Moroccan parents, with MCD deficiency. Family history revealed 2 neonatal deaths and several miscarriages. The patient had feeding problems, failure to thrive, and severe developmental delay with no language development. Diagnosis occurred at age 2 years when metabolic screening showed compensated metabolic acidosis, hyperammonemia, increased malonic acid, and other abnormalities. Skin fibroblasts showed complete MCD deficiency. Cardiac exam was normal. The patient also had a very poor appetite. Brain MRI showed generalized atrophy, major white matter loss, thickened cortex with pachygyria, and periventricular nodular heterotopia. These findings were consistent with a malformation of cortical development. A review of the literature found that some previously reported patients also had brain imaging abnormalities, such as frontotemporal atrophy and white matter changes.

INHERITANCE

The cases reported by Brown et al. (1984), Haan et al. (1986), and MacPhee et al. (1993) supported autosomal recessive inheritance.

CLINICAL MANAGEMENT

Haan et al. (1986) showed in one case that ... More on the omim web site

Subscribe to this protein entry history

Oct. 20, 2018: Protein entry updated
Automatic update: OMIM entry 248360 was added.

Oct. 19, 2018: Additional information
Initial protein addition to the database. This entry was referenced in Bryk and co-workers. (2017).