Unconventional myosin-IXb (MYO9B)

The protein contains 2157 amino acids for an estimated molecular weight of 243401 Da.

 

Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. Binds actin with high affinity both in the absence and presence of ATP and its mechanochemical activity is inhibited by calcium ions (PubMed:9490638). Also acts as a GTPase activator for RHOA (PubMed:9490638, PubMed:26529257). Plays a role in the regulation of cell migration via its role as RHOA GTPase activator. This is regulated by its interaction with the SLIT2 receptor ROBO1; interaction with ROBO1 impairs interaction with RHOA and subsequent activation of RHOA GTPase activity, and thereby leads to increased levels of active, GTP-bound RHOA (PubMed:26529257). (updated: March 8, 2011)

Protein identification was indicated in the following studies:

  1. Wilson and co-workers. (2016) Comparison of the Proteome of Adult and Cord Erythroid Cells, and Changes in the Proteome Following Reticulocyte Maturation. Mol Cell Proteomics. 15(6), 1938-1946.
  2. Bryk and co-workers. (2017) Quantitative Analysis of Human Red Blood Cell Proteome. J Proteome Res. 16(8), 2752-2761.

Methods

The following articles were analysed to gather the proteome content of erythrocytes.

The gene or protein list provided in the studies were processed using the ID mapping API of Uniprot in September 2018. The number of proteins identified and mapped without ambiguity in these studies is indicated below.
Only Swiss-Prot entries (reviewed) were considered for protein evidence assignation.

PublicationIdentification 1Uniprot mapping 2Not mapped /
Obsolete
TrEMBLSwiss-Prot
Goodman (2013)2289 (gene list)227853205992269
Lange (2014)123412347281224
Hegedus (2015)2638262202352387
Wilson (2016)165815281702911068
d'Alessandro (2017)18261817201815
Bryk (2017)20902060101081942
Chu (2018)18531804553621387

1 as available in the article and/or in supplementary material
2 uniprot mapping returns all protein isoforms as one entry

The compilation of older studies can be retrieved from the Red Blood Cell Collection database.

The data and differentiation stages presented below come from the proteomic study and analysis performed by our partners of the GReX consortium, more details are available in their published work.

No sequence conservation computed yet.

Interpro domains
Total structural coverage: 0%
Model score: 0
No model available.

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The reference OMIM entry for this protein is 602129

Myosin ixb; myo9b
Myosin, rat, homolog of; myr5

For background information on myosins, see MYO1A (601478).

CLONING

Wirth et al. (1996) isolated cDNAs encoding human myosin IXB (MYO9B) from liver and small intestine libraries. The cDNAs encode a 2,022-amino acid protein with a predicted mass of 229 kD. Like other myosins, MYO9B contains an N-terminal head or motor domain, a neck domain containing 4 tandemly repeated IQ motifs, and a large C-terminal tail. Compared to conventional myosins, the MYO9B head region contains several unusual insertions and the tail region contains a putative GTPase-activating protein domain and putative binding domains for zinc and diacylglycerol. MYO9B and its rat homolog, myr5, have regions of significant sequence divergence at their N and C termini. Wirth et al. (1996) suggested that the rat and human cDNAs may represent alternate splice variants. Northern blot analysis revealed that the gene is expressed as an 8-kb transcript with highest levels of expression observed in peripheral blood leukocytes and moderate expression in thymus and spleen. Wirth et al. (1996) found that expression of the MYO9B protein increased 4.7-fold following TPA-induced differentiation of HL-60 myelocytes into macrophage-like cells. Wirth et al. (1996) suggested that MYO9B may have a role in actin-based processes in myeloid cells. Post et al. (1998) identified a long variant of MYO9B that replaces the last 99 amino acids of the sequence reported by Wirth et al. (1996) with a different 228-amino acid C-terminal domain. Immunoblot analysis showed expression of 240- and 228-kD proteins.

MAPPING

Bahler et al. (1997) used fluorescence in situ hybridization to map the MYO9B gene to chromosome 19p13.2-p13.1. Cosmid mapping further refined this localization to 19p13.1, approximately 800 kb proximal to the MEL gene (165040) and approximately 100 kb distal to the ERBAL2 (132880) gene.

GENE FUNCTION

Immunoblot analysis by Post et al. (1998) showed that MYO9B binds calmodulin (CALM1; 114180) through IQ motifs located in its neck domain. Functional analysis indicated that MYO9B is an active motor that, like other CALM1-containing myosins, exhibits maximal velocity of actin filaments in the absence of calcium. Post et al. (1998) concluded that MYO9B contains calmodulin light chains and is a calcium-regulated, mechanochemically active motor that exhibits RHOGAP (see 602732) activity. Inoue et al. (2002) determined that MYO9B, a single-headed myosin, moves processively on actin filaments as a minus-end-directed motor. Thus, like MYO6 (600970), MYO9B moves in the reverse direction. Post et al. (2002) also performed functional analyses and concluded that MYO9B is single-headed and, like MYO5A (160777), is a processive actin-based motor. Using yeast 2-hybrid analysis, coimmunoprecipitation analysis, and in vitro pull-down assays, Saeki et al. (2005) found that rat and human BIG1 (ARFGEF1; 604141) bound the tail domain of MYO9B. BIG1 and MYO9B bound with a 1-to-1 stoichiometry, and mutation analysis showed that BIG1 bound specifically to the zinc finger/GAP domain of MYO9B. Binding of BIG1 to MYO9B interfered with binding of RhoA (165390) to MYO9B and inhibited the Rho-GAP activity of MYO9B in a dose-dependent manner. Likewise, RhoA inhibited binding of BIG1 to MYO9B.

MOLECULAR GENETICS

Celiac disease (212750), one of the best understood immune-related disorders, presents in the small intestine and results from the interplay between multiple genes and glu ... More on the omim web site

Subscribe to this protein entry history

Oct. 20, 2018: Protein entry updated
Automatic update: OMIM entry 602129 was added.

Oct. 19, 2018: Additional information
Initial protein addition to the database. This entry was referenced in Bryk and co-workers. (2017).