Laminin subunit alpha-2 (LAMA2)

The protein contains 3122 amino acids for an estimated molecular weight of 343905 Da.

 

Binding to cells via a high affinity receptor, laminin is thought to mediate the attachment, migration and organization of cells into tissues during embryonic development by interacting with other extracellular matrix components. (updated: Oct. 10, 2018)

Protein identification was indicated in the following studies:

  1. D'Alessandro and co-workers. (2017) Red blood cell proteomics update: is there more to discover? Blood Transfus. 15(2), 182-187.

Methods

The following articles were analysed to gather the proteome content of erythrocytes.

The gene or protein list provided in the studies were processed using the ID mapping API of Uniprot in September 2018. The number of proteins identified and mapped without ambiguity in these studies is indicated below.
Only Swiss-Prot entries (reviewed) were considered for protein evidence assignation.

PublicationIdentification 1Uniprot mapping 2Not mapped /
Obsolete
TrEMBLSwiss-Prot
Goodman (2013)2289 (gene list)227853205992269
Lange (2014)123412347281224
Hegedus (2015)2638262202352387
Wilson (2016)165815281702911068
d'Alessandro (2017)18261817201815
Bryk (2017)20902060101081942
Chu (2018)18531804553621387

1 as available in the article and/or in supplementary material
2 uniprot mapping returns all protein isoforms as one entry

The compilation of older studies can be retrieved from the Red Blood Cell Collection database.

The data and differentiation stages presented below come from the proteomic study and analysis performed by our partners of the GReX consortium, more details are available in their published work.

No sequence conservation computed yet.

Interpro domains
Total structural coverage: 0%
Model score: 0
No model available.

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VariantDescription
dbSNP:rs34626728
dbSNP:rs3778142
MDC1A
dbSNP:rs118083923
dbSNP:rs3816665
dbSNP:rs35879899
MDC1A
dbSNP:rs35277491
dbSNP:rs2306942
a breast cancer sample; somatic mutation
dbSNP:rs35889149
dbSNP:rs4143752
dbSNP:rs3828736
MDC1A
empty
dbSNP:rs2229848
empty
dbSNP:rs2244008
MDC1A
dbSNP:rs34551216
LGMDR23
dbSNP:rs886043693
LGMDR23
LGMDR23; decreased protein abundance in patient cells
MDC1A; unknown pathological significance
MDC1A
MDC1A
LGMDR23
LGMDR23
MDC1A

No binding partner found

The reference OMIM entry for this protein is 156225

Laminin, alpha-2; lama2
Laminin 2, heavy chain merosin, included
Laminin 2, included
Laminin m, included; lamm, included

DESCRIPTION

Laminin is a heterotrimeric extracellular matrix protein consisting of 3 chains: alpha-1 (LAMA1; 150320), beta-1 (LAMB1; 150240), and gamma-1, formerly called beta-2 (LAMC1; 150290). Several isoforms of each chain have been identified. Laminin-2 (merosin) is a heterotrimer composed of laminin subunits alpha-2, beta-1, and gamma-1. It is the main laminin found in muscle fibers. The LAMA2 gene encodes the alpha-2 chain of laminin-2.

CLONING

Merosin is a protein specifically found in the basement membranes of striated muscle and Schwann cells. It is also found in the basement membrane of placental trophoblasts. Ehrig et al. (1990) compared merosin with laminin, which is thought to be present in all basement membranes. They found that a cDNA clone derived from a merosin fragment contained a 3.4-kb open reading frame encoding 1,130 amino acids. The deduced amino acid sequence of the merosin polypeptide is similar to that of the C-terminal region of the laminin alpha-1 chain. The sequence identity between merosin and laminin is nearly 40% in this region. Like laminin, merosin is associated with the light chains laminin B1 and laminin B2, and the whole molecule has a cross-like structure similar to that of laminin. The authors estimated that the LAMA2 chain is at least 380 kD. Vuolteenaho et al. (1994) determined the primary structure of the laminin M chain (symbolized LAMM by them) from cDNA clones isolated from human placental libraries. The complete chain contains a 22-residue signal peptide and 3,088 residues of the mature M chain (3110 residues total). The M chain has a domain structure similar to that of the human and mouse A chains. Northern blot analysis of human fetal tissues showed that the M chain was expressed in most tissues, but not in liver, thymus, or bone. In situ hybridization localized the expression of the M chain gene to cells of mesenchymal origin. In contrast, expression of the A chain was observed only in kidney, testis, neuroretina, and some regions of the brain, as determined by Northern analyses. Epithelial and endothelial cells were negative for both M and A chain gene transcripts. Pegoraro et al. (2000) identified a novel alternatively spliced isoform of LAMA2. Direct sequencing showed that the isoform has a 138-bp in-frame deletion from nucleotides 4629 to 4766 of the coding sequence corresponding to about 70% of exon 31. This splicing event removes 46 amino acids in the cysteine-rich domain IIIa, just proximal to the triple coiled-coil region that associates with the beta-1 and gamma-1 chains of laminin. Immunofluorescent studies suggested that this isoform may impair proper laminin chain assembly.

GENE FUNCTION

Arahata et al. (1993) indicated that merosin is the same as laminin M, a striated muscle-specific, basal-lamina-associated protein. They found that the protein was reduced in the muscle fibers in Fukuyama congenital muscular dystrophy (253800), suggesting that it may play a primary role in the pathogenesis of that disorder. The laminin alpha-2 subunit is expressed in Schwann cells. Ng et al. (2000) provided evidence for the involvement of the specific trisaccharide unit of the phenolic glycolipid-1 (PGL1) of Mycobacterium leprae (see 246300) in determining the bacterial predilection to the peripheral nerve. PGL1 binds specifically to the native laminin-2 in the basal lamina of Schwann cell-axon units. This binding is mediated by the LG1, LG4, and LG5 modules pr ... More on the omim web site

Subscribe to this protein entry history

June 30, 2020: Protein entry updated
Automatic update: OMIM entry 156225 was added.

Oct. 19, 2018: Additional information
Initial protein addition to the database. This entry was referenced in Bryk and co-workers. (2017).