Presentation

Welcome to the website of the DSIMB bioinformatic group. We are part of the “red blood cell integrated biology” (Inserm UMR-S 1134 and Université Paris Diderot – Paris 7) lab, located at the French national institute of blood transfusion (INTS).



Latest publications from DSIMB


2022

Articles

  • 1 – 2022 ; Poveda-Cuevas, S. A. ; Etchebest, C. ; Barroso da Silva, F. L.
    Self-association features of NS1 proteins from different flaviviruses
    VIRUS RES ; 318 ; 198838 ; [google scholar] 

  • 2 – 2022 ; Vishwakarma, P. ; Vattekatte, A. M. ; Shinada, N. ; Diharce, J. ; Martins, C. ; Cadet, F. ; Gardebien, F. ; Etchebest, C. ; Nadaradjane, A. A. ; de Brevern, A. G.
    H Structural Modelling Approaches: A Critical Review
    INT J MOL SCI ; 23 ; (7) [google scholar] 

  • 3 – 2022 ; Cadet, X. F. ; Gelly, J. C. ; van Noord, A. ; Cadet, F. ; Acevedo-Rocha, C. G.
    Learning Strategies in Protein Directed Evolution
    METHODS MOL BIOL ; 2461 ; 225–275 ; [pmid:35727454] [doi:10.1007/978-1-0716-2152-3_15] [google scholar] 

  • 4 – 2022 ; Anies, S. ; Jallu, V. ; Diharce, J. ; Narwani, T. J. ; de Brevern, A. G.
    Subunit Dynamics Reveals Long-Range Effects of Missense Mutations on Calf Domains
    INT J MOL SCI ; 23 ; (2) [pmid:35055046] [doi:10.3390/ijms23020858] [google scholar] 

  • 5 – 2022 ; Allegrini, B. ; Jedele, S. ; David Nguyen, L. ; Mignotet, M. ; Rapetti-Mauss, R. ; Etchebest, C. ; Fenneteau, O. ; Loubat, A. ; Boutet, A. ; Thomas, C. ; Durin, J. ; Petit, A. ; Badens, C. ; Garçon, L. ; Da Costa,
    New KCNN4 Variants Associated With Anemia: Stomatocytosis Without Erythrocyte Dehydration
    FRONT PHYSIOL ; 13 ; 918620 ; [google scholar] 

  • 6 – 2022 ; Rebehmed, J. ; de Brevern, A. G. ; Sowdhamini, R. ; Joseph, A. P.
    Editorial: Advances in Molecular Docking and Structure-Based Modelling
    FRONT MOL BIOSCI ; 9 ; 839826 ; [pmid:35155583] [doi:10.3389/fmolb.2022.839826] [google scholar] 

  • 7 – 2022 ; Maljkovi?, M. M. ; Miti?, N. S. ; de Brevern, A. G.
    Prediction of structural alphabet protein blocks using data mining
    BIOCHIMIE ; 197 ; 74–85 ; [pmid:35143919] [doi:10.1016/j.biochi.2022.01.019] [google scholar] 

  • 8 – 2022 ; de Brevern, A. G. ; Rebehmed, J.
    Current status of PTMs structural databases: applications, limitations and prospects
    AMINO ACIDS ; [pmid:35020020] [doi:10.1007/s00726-021-03119-z] [google scholar] 

  • 9 – 2022 ; Craveur, P. ; Narwani, T. J. ; Srinivasan, N. ; Gelly, J. C. ; Rebehmed, J. ; de Brevern, A. G.
    Shaking the \beta-bulges
    IEEE/ACM TRANS COMPUT BIOL BIOINFORM ; 19 ; (1) 14–18 ; [pmid:34115590] [doi:10.1109/TCBB.2021.3088444] [google scholar] 

  • 10 – 2022 ; Cretin, G; Galochkina, T; Vander Meersche, Y; de Brevern, A. G.; Postic, G; Gelly, J. C.
    SWORD2: hierarchical analysis of protein 3D structures
    NUCLEIC ACIDS RESEARCH ; 50 ; (W1) W732-W738 ; [pmid:35580056] [doi:10.1093/nar/gkac370] [google scholar] 

  • 11 – 2022 ; El Jahrani, N.; Cretin, G.; de Brevern, A. G.
    CALR-ETdb, the database of calreticulin variants diversity in essential thrombocythemia
    PLATELETS ; 33 ; (1) 157-167 ; [pmid:33444113] [doi:10.1080/09537104.2020.1869712] [google scholar] 





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