Probably involved in lipid transport. Can bind sphingosine-1-phosphate, myristic acid, palmitic acid and stearic acid, retinol, all-trans-retinoic acid and 9-cis-retinoic acid. (updated: Oct. 10, 2018)
The data and differentiation stages presented below come from the proteomic study and analysis performed by our partners of the GReX consortium, more details are available in their published work.
No sequence conservation computed yet.
Total structural coverage: 91%
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The reference OMIM entry for this protein is 606907
Apolipoprotein m; apom
Ng20, mouse, homolog of
CLONING
Xu and Dahlback (1999) identified APOM through N-terminal sequencing of proteins associated with triglyceride-rich lipoproteins (TGRLP). By searching 2 liver cDNA libraries with probes designed from an EST containing the sequence, they cloned human APOM. The deduced 188-amino acid protein has a calculated molecular mass of about 21 kD. It contains a potential N-glycosylation site, 2 possible disulfide bridges, and a hydrophobic alpha-helical signal peptide that is retained in the mature protein. Sequence analysis revealed 79% identity between the human and mouse proteins. Northern blot analysis by Xu and Dahlback (1999) detected restricted expression of a 750-bp transcript in liver and kidney. Northern blot analysis of several cell lines by Albertella et al. (1996) detected a 1.1-kb transcript in HepG2 liver cells but not in human fibroblast, leukocyte, or monocytic cell lines. By Western blot analysis, Xu and Dahlback (1999) found that APOM is a minor component of high and low density lipoproteins as well as TGRLP. In vitro translation in the presence of microsomes resulted in a protein of 26 kD, suggesting that APOM is translocated through the membrane and glycosylated.
GENE STRUCTURE
By Southern blot analysis, Albertella et al. (1996) determined that APOM is present in single copy in the genome.
MAPPING
By homology with the corresponding mouse gene, Ng20, which maps to chromosome 17, and by sequence analysis, Xu and Dahlback (1999) mapped the human APOM gene to chromosome 6p21.3, between the BAT3 (
142590) and BAT4 (
142610) genes.
GENE FUNCTION
Blaho et al. (2015) demonstrated that ApoM-sphingosine-1-phosphate (S1P) is dispensable for lymphocyte trafficking yet restrains lymphopoiesis by activating the S1P1 receptor (
601974) on bone marrow lymphocyte progenitors. Mice that lacked ApoM (Apom -/-) had increased proliferation of lineage-negative/Sca1+/cKit+ hematopoietic progenitor cells (LSKs) and common lymphoid progenitors (CLPs) in bone marrow. Pharmacologic activation or genetic overexpression of S1P1 suppressed this progenitor cell proliferation in vivo. ApoM was stably associated with bone marrow CLPs, which showed active S1P1 signaling in vivo. Moreover, ApoM-bound S1P, but not albumin (
103600)-bound S1P, inhibited lymphopoiesis in vitro. Upon immune stimulation, Apom -/- mice developed more severe experimental autoimmune encephalomyelitis, characterized by increased lymphocytes in the central nervous system and breakdown of the blood-brain barrier. Thus, Blaho et al. (2015) concluded that the ApoM-S1P-S1P1 signaling axis restrains the lymphocyte compartment and, subsequently, adaptive immune responses.
ANIMAL MODEL
Wolfrum et al. (2005) demonstrated that mice deficient in Apom accumulated cholesterol in large HDL particles while the conversion of HDL to pre-beta-HDL was impaired, leading to a markedly reduced cholesterol efflux from macrophages to Apom-deficient HDL compared to normal HDL in vitro. Overexpression of Apom in low density lipoprotein receptor (LDLR;
606945)-null mice protected against atherosclerosis when the mice were challenged with a cholesterol-enriched diet. Wolfrum et al. (2005) concluded that APOM is important for the formation of pre-beta-HDL and cholesterol efflux to HDL, and thereby inhibits formation of atherosclerotic lesions. ...
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Subscribe to this protein entry history
June 29, 2020: Protein entry updated
Automatic update: OMIM entry 606907 was added.
Feb. 22, 2019: Protein entry updated
Automatic update: comparative model was added.
Feb. 22, 2019: Protein entry updated
Automatic update: model status changed
Oct. 19, 2018: Additional information
Initial protein addition to the database. This entry was referenced in Bryk and co-workers. (2017).