E3 ubiquitin-protein ligase RNF213 (RNF213)

The protein contains 5207 amino acids for an estimated molecular weight of 591407 Da.

 

E3 ubiquitin-protein ligase involved in angiogenesis (PubMed:21799892, PubMed:26278786, PubMed:26766444, PubMed:26126547). Involved in the non-canonical Wnt signaling pathway in vascular development: acts by mediating ubiquitination and degradation of FLNA and NFATC2 downstream of RSPO3, leading to inhibit the non-canonical Wnt signaling pathway and promoting vessel regression (PubMed:26766444). Also has ATPase activity (PubMed:24658080, PubMed:26126547). (updated: Oct. 10, 2018)

Protein identification was indicated in the following studies:

  1. Wilson and co-workers. (2016) Comparison of the Proteome of Adult and Cord Erythroid Cells, and Changes in the Proteome Following Reticulocyte Maturation. Mol Cell Proteomics. 15(6), 1938-1946.
  2. D'Alessandro and co-workers. (2017) Red blood cell proteomics update: is there more to discover? Blood Transfus. 15(2), 182-187.
  3. Chu and co-workers. (2018) Quantitative mass spectrometry of human reticulocytes reveal proteome-wide modifications during maturation. Br J Haematol. 180(1), 118-133.

Methods

The following articles were analysed to gather the proteome content of erythrocytes.

The gene or protein list provided in the studies were processed using the ID mapping API of Uniprot in September 2018. The number of proteins identified and mapped without ambiguity in these studies is indicated below.
Only Swiss-Prot entries (reviewed) were considered for protein evidence assignation.

PublicationIdentification 1Uniprot mapping 2Not mapped /
Obsolete
TrEMBLSwiss-Prot
Goodman (2013)2289 (gene list)227853205992269
Lange (2014)123412347281224
Hegedus (2015)2638262202352387
Wilson (2016)165815281702911068
d'Alessandro (2017)18261817201815
Bryk (2017)20902060101081942
Chu (2018)18531804553621387

1 as available in the article and/or in supplementary material
2 uniprot mapping returns all protein isoforms as one entry

The compilation of older studies can be retrieved from the Red Blood Cell Collection database.

The data and differentiation stages presented below come from the proteomic study and analysis performed by our partners of the GReX consortium, more details are available in their published work.

No sequence conservation computed yet.

Interpro domains
Total structural coverage: 0%
Model score: 0
No model available.

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VariantDescription
Rare variant detected in a sporadic case of Moyamoya disease in East Asian population
dbSNP:rs138516230
Rare variant detected in a sporadic case of Moyamoya disease
dbSNP:rs61740658
Rare variant detected in a sporadic case of Moyamoya disease in Caucasian population
Rare variant detected in a sporadic case of Moyamoya disease in East Asian population
Variant detected in cases of Moyamoya disease in Caucasian populations
Rare variant detected in a sporadic case of Moyamoya disease in Caucasian population
Rare variant detected in a sporadic case of Moyamoya disease in East Asian population
MYMY2; variant detected in cases of Moyamoya disease in Caucasian and Asian populations; inhibitory effect on angiogenic activity of vascular endothel
Rare variant detected in a sporadic case of Moyamoya disease in Caucasian population; associated with K-4042 in cases of Moyamoya disease in Slovakian
Rare variant associated with C-4019 in cases of Moyamoya disease in Slovakian and Czech populations
Variant detected in cases of Moyamoya disease in Caucasian populations
Rare variant detected in a sporadic case of Moyamoya disease in Asian population
Rare variant detected in a sporadic case of Moyamoya disease in Caucasian population
Rare variant detected in a sporadic case of Moyamoya disease in East Asian population
Rare variant detected in cases of Moyamoya disease in Slovakian and Czech populations; inhibitory effect on angiogenic activity of vascular endothelia
Found in a heterozygous family with heterogeneous intracerebral vasculopathy
Rare variant detected in a sporadic case of Moyamoya disease in Caucasian population
Rare variant detected in a sporadic case of Moyamoya disease in East Asian population
MYMY2
Rare variant detected in a sporadic case of Moyamoya disease
Rare variant detected in a sporadic case of Moyamoya disease in East Asian population
Variant detected in cases of Moyamoya disease in Caucasian populations
Rare variant detected in a sporadic case of Moyamoya disease in East Asian population
Variant of uncertain significance
Rare variant detected in a sporadic case of Moyamoya disease in Caucasian population
Rare variant detected in a sporadic case of Moyamoya disease
MYMY2; very frequent in individuals affected by Moyamoya disease; strongly increases the risk of Moyamoya disease; induces genomic instability; shows
Variant detected in cases of Moyamoya disease in East Asian populations
Variant detected in cases of Moyamoya disease in East Asian populations and rare variant detected in a sporadic case of Moyamoya disease
Variant detected in cases of Moyamoya disease in East Asian population
Rare variant detected in a sporadic case of Moyamoya disease in East Asian population
Variant detected in cases of Moyamoya disease in East Asian populations
Rare variant detected in a sporadic case of Moyamoya disease in Caucasian population
Variant detected in cases of Moyamoya disease in East Asian populations

The reference OMIM entry for this protein is 607151

Moyamoya disease 2; mymy2

A number sign (#) is used with this entry because evidence suggests that susceptibility to moyamoya disease-2 (MYMY2) may be conferred by variation in the RNF213 gene (613768) on chromosome 17q25.

DESCRIPTION

Moyamoya disease is a progressive cerebral angiopathy characterized by bilateral internal carotid artery stenosis and abnormal collateral vessels. The abnormal vessels resemble a 'puff of smoke' (moyamoya) on cerebral angiogram. Affected individuals can develop transient ischemic attacks and/or cerebral infarction, and rupture of the collateral vessels can cause intracranial hemorrhage (summary by Kamada et al., 2011). For a general phenotypic description and a discussion of genetic heterogeneity of moyamoya disease, see MYMY1 (252350).

CLINICAL FEATURES

Liu et al. (2011) reported a Caucasian father of Czech descent and his 3 affected children with moyamoya disease. The father had a mild ischemic stroke at age 30 years, and his mother had died of ischemic stroke at age 35. The 3 children developed moyamoya disease at ages 5, 9, and 3 years, respectively. One had involuntary movements and another had signs of ischemic stroke. Diagnosis of the disorder was confirmed by brain MRI. Miyatake et al. (2012) reported 2 Japanese sibs with MYMY2 confirmed by genetic analysis. One sib was homozygous for the 14576G-A RNF213 variant (613768.0001) and the other was heterozygous for the same variant. The homozygous 21-year-old brother had a transient ischemic attack (TIA) at age 2 years and was found to have moyamoya disease. Brain imaging showed a low-density area around the right middle cerebral artery and atrophy of the right cerebral hemisphere; this was associated with left hemiparesis. Cerebral angiograms showed multiple bilateral vascular abnormalities. He had progression of the disorder, with recurrent strokes despite multiple surgeries, and slow intellectual deterioration. Residual features included headache, paresis, and visual defects. His 18-year-old sister, who was heterozygous for the mutation, had her fist transient ischemic attack at age 17 years. Brain MRI was normal, but cerebral angiograms showed unilateral changes consistent with moyamoya disease. The occlusive changes were not as severe as in her affected brother. Vascular surgery resulted in complete remission of TIAs. Family genetic analysis showed that both unaffected parents and an unaffected third sib also carried a heterozygous 14576G-A mutation. The report suggested a dosage effect for the 14576G-A variant.

OTHER FEATURES

Nishimura et al. (2003) described a 4-year-old boy with microcephalic osteodysplastic primordial dwarfism II (MOPD2; 210720) and cafe-au-lait spots who developed left hemiparesis and seizures and was found to have moyamoya disease on MRI, with infarction of the right cerebral hemisphere. FISH analysis of the neurofibromatosis locus (NF1; 162200) did not show any deletions, and the boy had no neurofibromas or Lisch nodules. Young et al. (2004) reported a second patient with MOPD2, cafe-au-lait spots, and moyamoya disease. She began having episodes of weakness and seizures at age 2.5 years; cerebral angiography revealed typical moyamoya vessels and MRI showed multiple areas of cerebral infarction. Standard karyotyping, specific sister chromatid exchange and diepoxy chromosome breakage analysis, and mitochondrial mutation testing were normal. Young et al. (2004) suggested that the list of moyamoya disease associations sho ... More on the omim web site

Subscribe to this protein entry history

Oct. 19, 2018: Additional information
Initial protein addition to the database. This entry was referenced in Bryk and co-workers. (2017).

Oct. 19, 2018: Protein entry updated
Automatic update: OMIM entry 607151 was added.