Neisserial surface protein A (NSPA)
Organism: Neisseria meningitidis
Model: Experimental
Representation: Coarse-grained
Type: β-sheet
Pfam Acc: PF02462
PDB ID: 1P4T
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 21.0 Å
Number of TM segments = 5
Sequence positions:
A: 41-52|61-68|83-89|105-112|125-135
Tilt angles:
A - Segment: 41-52 - Tilt: 54.6°
A - Segment: 61-68 - Tilt: 35.0°
A - Segment: 83-89 - Tilt: 6.8°
A - Segment: 105-112 - Tilt: 29.0°
A - Segment: 125-135 - Tilt: 50.6°
Structural assessment:
MAIDEN score = 107.1021
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]