Polysulfide reductase native structure
Organism: Thermus thermophilus
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF03916
PDB ID: 2VPZ
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 30.0 Å
Number of TM segments = 16
Sequence positions:
C: 943-965|977-996|1015-1036|1038-1063|1073-1093|1100-1120|1134-1151|1154-1172
G: 2123-2145|2157-2176|2195-2215|2222-2243|2253-2274|2280-2300|2314-2331|2333-2352
Tilt angles:
C - Segment: 943-965 - Tilt: 40.9°
C - Segment: 977-996 - Tilt: 26.6°
C - Segment: 1015-1036 - Tilt: 23.2°
C - Segment: 1038-1063 - Tilt: 41.0°
C - Segment: 1073-1093 - Tilt: 17.2°
C - Segment: 1100-1120 - Tilt: 25.7°
C - Segment: 1134-1151 - Tilt: 7.8°
C - Segment: 1154-1172 - Tilt: 15.9°
G - Segment: 2123-2145 - Tilt: 37.2°
G - Segment: 2157-2176 - Tilt: 24.5°
G - Segment: 2195-2215 - Tilt: 18.4°
G - Segment: 2222-2243 - Tilt: 30.7°
G - Segment: 2253-2274 - Tilt: 25.3°
G - Segment: 2280-2300 - Tilt: 25.2°
G - Segment: 2314-2331 - Tilt: 7.0°
G - Segment: 2333-2352 - Tilt: 14.8°
Structural assessment:
MAIDEN score = -143.1130
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]