Sodium-coupled glycine betaine symporter betp from corynebacterium glutamicum with bound substrate
Organism: Corynebacterium glutamicum
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF02028
PDB ID: 2WIT
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 24.6 Å
Number of TM segments = 33
Sequence positions:
A: 64-81|91-112|178-197|240-262|280-294|305-354|363-381|402-419|452-473|493-509|517-534
C: 64-81|91-112|178-197|240-262|279-294|305-354|363-381|402-419|449-473|493-509|515-534
B: 63-79|91-112|178-197|240-262|280-295|305-354|363-381|402-419|452-473|493-508|517-534
Tilt angles:
A - Segment: 64-81 - Tilt: 2.4°
A - Segment: 91-112 - Tilt: 48.8°
A - Segment: 178-197 - Tilt: 37.0°
A - Segment: 240-262 - Tilt: 45.1°
A - Segment: 280-294 - Tilt: 18.5°
A - Segment: 305-354 - Tilt: 62.3°
A - Segment: 363-381 - Tilt: 32.5°
A - Segment: 402-419 - Tilt: 30.8°
A - Segment: 452-473 - Tilt: 51.8°
A - Segment: 493-509 - Tilt: 25.8°
A - Segment: 517-534 - Tilt: 36.0°
C - Segment: 64-81 - Tilt: 1.1°
C - Segment: 91-112 - Tilt: 48.8°
C - Segment: 178-197 - Tilt: 37.2°
C - Segment: 240-262 - Tilt: 46.0°
C - Segment: 279-294 - Tilt: 10.5°
C - Segment: 305-354 - Tilt: 61.3°
C - Segment: 363-381 - Tilt: 31.2°
C - Segment: 402-419 - Tilt: 31.9°
C - Segment: 449-473 - Tilt: 52.9°
C - Segment: 493-509 - Tilt: 24.4°
C - Segment: 515-534 - Tilt: 39.9°
B - Segment: 63-79 - Tilt: 10.3°
B - Segment: 91-112 - Tilt: 47.4°
B - Segment: 178-197 - Tilt: 38.5°
B - Segment: 240-262 - Tilt: 46.6°
B - Segment: 280-295 - Tilt: 9.1°
B - Segment: 305-354 - Tilt: 61.8°
B - Segment: 363-381 - Tilt: 32.1°
B - Segment: 402-419 - Tilt: 32.1°
B - Segment: 452-473 - Tilt: 53.4°
B - Segment: 493-508 - Tilt: 17.0°
B - Segment: 517-534 - Tilt: 36.1°
Structural assessment:
MAIDEN score = -286.0293
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]