Xanthorhodopsin, a Light-Driven Ion Pump with Dual Chromophore
Organism: Salinibacter ruber
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF01036
PDB ID: 3DDL
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 21.9 Å
Number of TM segments = 7
Sequence positions:
A: 18-35|50-64|92-105|125-141|152-166|195-209|211-244
Tilt angles:
A - Segment: 18-35 - Tilt: 44.2°
A - Segment: 50-64 - Tilt: 24.7°
A - Segment: 92-105 - Tilt: 15.4°
A - Segment: 125-141 - Tilt: 28.1°
A - Segment: 152-166 - Tilt: 19.1°
A - Segment: 195-209 - Tilt: 30.6°
A - Segment: 211-244 - Tilt: 50.3°
Structural assessment:
MAIDEN score = -48.6988
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]