GluN1a/GluN2B NMDA Receptor Ion Channel
Organism: Rattus norvegicus
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00060
PDB ID: 4PE5
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.7 Å
Number of TM segments = 9
Sequence positions:
A: 563-580|606-644
C: 563-577|606-644|816-831
B: 559-602|604-643|824-838
D: 821-837
Tilt angles:
A - Segment: 563-580 - Tilt: 40.1°
A - Segment: 606-644 - Tilt: 29.3°
C - Segment: 563-577 - Tilt: 29.1°
C - Segment: 606-644 - Tilt: 25.4°
C - Segment: 816-831 - Tilt: 24.8°
B - Segment: 559-602 - Tilt: 10.5°
B - Segment: 604-643 - Tilt: 28.3°
B - Segment: 824-838 - Tilt: 34.1°
D - Segment: 821-837 - Tilt: 37.1°
Structural assessment:
MAIDEN score = -98.8787
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]