Bacterial ABC transporter involved in the import of the acidic polysaccharide alginate
Organism: Sphingomonas sp.
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00528
PDB ID: 4TQU
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 34.0 Å
Number of TM segments = 12
Sequence positions:
M: 35-84|92-121|128-156|181-205|242-265|290-315
N: 16-41|76-102|112-140|142-161|195-220|261-283
Tilt angles:
M - Segment: 35-84 - Tilt: 53.6°
M - Segment: 92-121 - Tilt: 46.8°
M - Segment: 128-156 - Tilt: 28.1°
M - Segment: 181-205 - Tilt: 26.8°
M - Segment: 242-265 - Tilt: 3.1°
M - Segment: 290-315 - Tilt: 23.8°
N - Segment: 16-41 - Tilt: 31.7°
N - Segment: 76-102 - Tilt: 32.2°
N - Segment: 112-140 - Tilt: 22.4°
N - Segment: 142-161 - Tilt: 10.5°
N - Segment: 195-220 - Tilt: 19.0°
N - Segment: 261-283 - Tilt: 11.3°
Structural assessment:
MAIDEN score = -141.2912
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]