Bacterial ABC transporter involved in the import of the acidic polysaccharide alginate
Organism: Sphingomonas sp.
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00528
PDB ID: 4TQU
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 31.2 Å
Number of TM segments = 12
Sequence positions:
M: 14-39|57-85|92-116|146-168|205-226|257-279
N: 299-324|357-382|395-423|425-443|480-502|544-565
Tilt angles:
M - Segment: 14-39 - Tilt: 40.3°
M - Segment: 57-85 - Tilt: 45.9°
M - Segment: 92-116 - Tilt: 24.0°
M - Segment: 146-168 - Tilt: 23.0°
M - Segment: 205-226 - Tilt: 9.2°
M - Segment: 257-279 - Tilt: 22.9°
N - Segment: 299-324 - Tilt: 37.1°
N - Segment: 357-382 - Tilt: 36.0°
N - Segment: 395-423 - Tilt: 27.0°
N - Segment: 425-443 - Tilt: 16.3°
N - Segment: 480-502 - Tilt: 16.0°
N - Segment: 544-565 - Tilt: 14.4°
Structural assessment:
MAIDEN score = -104.8395
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]