Alpha 1 glycine receptor transmembrane structure fused to the extracellular domain of GLIC
Organism: Gloeobacter violaceus
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF02932
PDB ID: 4X5T
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 23.7 Å
Number of TM segments = 15
Sequence positions:
A: 220-236|258-276|279-295
C: 220-236|258-276|279-295
B: 220-236|258-276|280-295
E: 220-236|259-276|279-295
D: 220-236|259-277|279-295
Tilt angles:
A - Segment: 220-236 - Tilt: 15.7°
A - Segment: 258-276 - Tilt: 24.2°
A - Segment: 279-295 - Tilt: 16.1°
C - Segment: 220-236 - Tilt: 19.9°
C - Segment: 258-276 - Tilt: 24.7°
C - Segment: 279-295 - Tilt: 16.6°
B - Segment: 220-236 - Tilt: 17.4°
B - Segment: 258-276 - Tilt: 23.6°
B - Segment: 280-295 - Tilt: 19.5°
E - Segment: 220-236 - Tilt: 16.7°
E - Segment: 259-276 - Tilt: 23.9°
E - Segment: 279-295 - Tilt: 17.5°
D - Segment: 220-236 - Tilt: 18.1°
D - Segment: 259-277 - Tilt: 28.1°
D - Segment: 279-295 - Tilt: 17.5°
Structural assessment:
MAIDEN score = -92.8761
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]