Precise Resting State of Thermus thermophilus SecYEG
Organism: Thermus thermophilus
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00344
PDB ID: 5AWW
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 23.4 Å
Number of TM segments = 13
Sequence positions:
Y: 17-32|71-90|113-128|158-176|179-197|218-234|270-287|309-325|369-385|394-411
E: 27-52
G: 10-26|51-66
Tilt angles:
Y - Segment: 17-32 - Tilt: 22.8°
Y - Segment: 71-90 - Tilt: 47.8°
Y - Segment: 113-128 - Tilt: 7.7°
Y - Segment: 158-176 - Tilt: 39.8°
Y - Segment: 179-197 - Tilt: 34.8°
Y - Segment: 218-234 - Tilt: 27.7°
Y - Segment: 270-287 - Tilt: 38.2°
Y - Segment: 309-325 - Tilt: 17.0°
Y - Segment: 369-385 - Tilt: 29.3°
Y - Segment: 394-411 - Tilt: 23.3°
E - Segment: 27-52 - Tilt: 53.4°
G - Segment: 10-26 - Tilt: 29.7°
G - Segment: 51-66 - Tilt: 9.0°
Structural assessment:
MAIDEN score = -132.5535
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]