ATP-driven lipid-linked oligosaccharide flippase PglK in apo-inward facing state (2)
Organism: Campylobacter jejuni
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00664
PDB ID: 5C76
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 34.0 Å
Number of TM segments = 11
Sequence positions:
A: 17-39|74-98|148-170|175-208|238-270|294-318
D: 83-112|139-165|175-197|253-274|296-326
Tilt angles:
A - Segment: 17-39 - Tilt: 15.6°
A - Segment: 74-98 - Tilt: 26.3°
A - Segment: 148-170 - Tilt: 8.9°
A - Segment: 175-208 - Tilt: 49.1°
A - Segment: 238-270 - Tilt: 47.4°
A - Segment: 294-318 - Tilt: 25.6°
D - Segment: 83-112 - Tilt: 40.9°
D - Segment: 139-165 - Tilt: 31.3°
D - Segment: 175-197 - Tilt: 12.5°
D - Segment: 253-274 - Tilt: 17.8°
D - Segment: 296-326 - Tilt: 47.2°
Structural assessment:
MAIDEN score = -121.5887
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]