Transmembrane protein 1
Organism: Alternaria brassicicola
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: B6RIT9
Pfam Acc: PF00501
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 22.0 Å
Number of TM segments = 3
Sequence positions:
: 362-375|383-408|485-493
Tilt angles:
- Segment: 362-375 - Tilt: 36.1°
- Segment: 383-408 - Tilt: 41.0°
- Segment: 485-493 - Tilt: 24.9°
Structural assessment:
MAIDEN score = 43.3391
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]