7 transmembrane receptor (Rhodopsin family)
Organism: Trichinella spiralis
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: E5SY86
Pfam Acc: PF00001
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 21.0 Å
Number of TM segments = 5
Sequence positions:
: 171-193|211-227|269-284|316-329|349-363
Tilt angles:
- Segment: 171-193 - Tilt: 55.6°
- Segment: 211-227 - Tilt: 41.8°
- Segment: 269-284 - Tilt: 37.0°
- Segment: 316-329 - Tilt: 24.9°
- Segment: 349-363 - Tilt: 31.0°
Structural assessment:
MAIDEN score = -1.9414
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]