OmpA-like transmembrane region
Organism: Nitrobacter hamburgensis
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q1QRH0
Pfam Acc: PF13505
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 3
Sequence positions:
: 92-103|115-124|126-145
Tilt angles:
- Segment: 92-103 - Tilt: 47.4°
- Segment: 115-124 - Tilt: 52.1°
- Segment: 126-145 - Tilt: 49.8°
Structural assessment:
MAIDEN score = 9.6280
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]