Envelope glycoprotein gp160 precursor
Organism: Human immunodeficiency virus type 1 group M subtype C
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q75008
Pfam Acc: PF00516
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 21.0 Å
Number of TM segments = 4
Sequence positions:
: 114-134|196-206|291-298|329-335
Tilt angles:
- Segment: 114-134 - Tilt: 70.2°
- Segment: 196-206 - Tilt: 68.3°
- Segment: 291-298 - Tilt: 3.2°
- Segment: 329-335 - Tilt: 17.0°
Structural assessment:
MAIDEN score = 38.6937
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]