Envelope glycoprotein gp160 precursor
Organism: Human immunodeficiency virus type 1 group O
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q79670
Pfam Acc: PF00516
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 21.0 Å
Number of TM segments = 4
Sequence positions:
: 125-134|198-201|300-306|332-334
Tilt angles:
- Segment: 125-134 - Tilt: 50.6°
- Segment: 198-201 - Tilt: 47.8°
- Segment: 300-306 - Tilt: 21.0°
- Segment: 332-334 - Tilt: 26.3°
Structural assessment:
MAIDEN score = -0.1876
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]