Transmembrane glycoprotein 40
Organism: Simian immunodeficiency virus
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q87981
Pfam Acc: PF00517
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 2
Sequence positions:
: 39-76|108-133
Tilt angles:
- Segment: 39-76 - Tilt: 71.6°
- Segment: 108-133 - Tilt: 64.0°
Structural assessment:
MAIDEN score = -23.3235
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]