Contactin-associated protein-like 2 (CNTNAP2)

The protein contains 1331 amino acids for an estimated molecular weight of 148167 Da.

 

Required for gap junction formation (Probable). Required, with CNTNAP1, for radial and longitudinal organization of myelinated axons. Plays a role in the formation of functional distinct domains critical for saltatory conduction of nerve impulses in myelinated nerve fibers. Demarcates the juxtaparanodal region of the axo-glial junction. (updated: April 7, 2021)

Protein identification was indicated in the following studies:

  1. D'Alessandro and co-workers. (2017) Red blood cell proteomics update: is there more to discover? Blood Transfus. 15(2), 182-187.

Methods

The following articles were analysed to gather the proteome content of erythrocytes.

The gene or protein list provided in the studies were processed using the ID mapping API of Uniprot in September 2018. The number of proteins identified and mapped without ambiguity in these studies is indicated below.
Only Swiss-Prot entries (reviewed) were considered for protein evidence assignation.

PublicationIdentification 1Uniprot mapping 2Not mapped /
Obsolete
TrEMBLSwiss-Prot
Goodman (2013)2289 (gene list)227853205992269
Lange (2014)123412347281224
Hegedus (2015)2638262202352387
Wilson (2016)165815281702911068
d'Alessandro (2017)18261817201815
Bryk (2017)20902060101081942
Chu (2018)18531804553621387

1 as available in the article and/or in supplementary material
2 uniprot mapping returns all protein isoforms as one entry

The compilation of older studies can be retrieved from the Red Blood Cell Collection database.

The data and differentiation stages presented below come from the proteomic study and analysis performed by our partners of the GReX consortium, more details are available in their published work.

No sequence conservation computed yet.

Interpro domains
Total structural coverage: 0%
Model score: 0
No model available.

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VariantDescription
dbSNP:rs189731792
dbSNP:rs771028883
dbSNP:rs372345438
dbSNP:rs794727802
dbSNP:rs371839994
dbSNP:rs143877693
dbSNP:rs772179690
dbSNP:rs368905425
dbSNP:rs764412489
dbSNP:rs760930032
dbSNP:rs369867547
dbSNP:rs200413148
May be a risk factor for autism
dbSNP:rs759801195
dbSNP:rs144003410
dbSNP:rs111599875
dbSNP:rs983036503
dbSNP:rs774709566
dbSNP:rs781236853
dbSNP:rs761684414
dbSNP:rs767821521
dbSNP:rs760047247

No binding partner found

The reference OMIM entry for this protein is 604569

Contactin-associated protein-like 2; cntnap2
Contactin-associated protein 2; caspr2
Neurexin iv, drosophila, homolog of; nrxn4

DESCRIPTION

The CNTNAP2 gene encodes a neuronal transmembrane protein member of the neurexin superfamily involved in neural-glia interactions and clustering of potassium channels in myelinated axons. Rapid conduction in myelinated axons depends on the generation of specialized subcellular domains to which different sets of ion channels are localized. Contactin-associated protein (CNTNAP1; 602346) is another member of the neurexin superfamily (summary by Poliak et al., 1999).

CLONING

By searching sequence databases for homologs of CASPR, Poliak et al. (1999) identified several CASPR-related ESTs from various nervous system sources. They used 1 of these ESTs to isolate human brain and spinal cord cDNAs representing the entire CASPR2 coding sequence. The structural organization of the deduced 1,333-amino acid CASPR2 protein is very similar to that of CASPR and the related Drosophila Nrx IV, all having the hallmarks of type I transmembrane proteins. The extracellular region of CASPR2 is a mosaic of domains, including discoidin/neuropilin- and fibrinogen-like domains, 2 epidermal growth factor (EGF; 131530) repeats, and 4 domains similar to a region in laminin A (150320), referred to as the G domain. The extracellular region of CASPR2 also contains 12 potential N-linked glycosylation sites. CASPR2 has a short C-terminal region containing a binding site for type II PDZ domains. CASPR2 shares 45% amino acid sequence identity with CASPR and 34% identity with Drosophila Nrx IV. Recombinant CASPR2 expressed in mammalian cells had an apparent molecular mass of 180 kD. Northern blot analysis of human tissues detected 9- and 10-kb CASPR2 transcripts in brain, but only the 9-kb transcript in spinal cord. Low levels of CASPR2 mRNA were also detected in the ovary and prostate. The authors determined the expression pattern of CASPR2 within the adult human central nervous system. Like the spinal cord, the corpus callosum expressed only the 9-kb CASPR2 transcript. The 9-kb transcript was also the predominant transcript in the medulla, substantia nigra, and caudate nucleus. All the other regions examined, namely cerebellum, cortex, occipital pole, frontal lobe, temporal lobe, putamen, amygdala, hippocampus, subthalamic nucleus, and thalamus, expressed similar levels of the 9- and 10-kb CASPR2 transcripts. Immunolocalization of Caspr2 in adult rat brain demonstrated that Caspr2 is differentially expressed in distinct neuronal structures, including the soma and dendrites, and in specific short-segmented pairs along myelinated axons. Caspr2 expression in myelinated nerves was mostly confined to the axon at the juxtaparanodal region and to some isolated paranodal loops. In the juxtaparanodal region, Caspr2 precisely colocalized with Shaker-like potassium channels. Caspr2 specifically associated with Kv1.1 (176260), Kv1.2 (176262), and their Kv-beta-2 subunit (601142). This association involved the C-terminal region of Caspr2. Poliak et al. (1999) suggested that CASPR2 may stabilize the localization of potassium channels in the juxtaparanodal region, and that CASPR2 family members may play a role in the local differentiation of the axon into distinct functional subdomains. Krumbiegel et al. (2011) performed comprehensive mRNA and protein expression analysis in ocular tissues from eyes with PEX syndrome/glaucoma (177650) and normal and glaucomatous control eyes. Quantitative real-time PCR showed ubiquitous expression of CNTNAP2 in virtually ... More on the omim web site

Subscribe to this protein entry history

April 10, 2021: Protein entry updated
Automatic update: Entry updated from uniprot information.

June 30, 2020: Protein entry updated
Automatic update: OMIM entry 604569 was added.

Oct. 19, 2018: Additional information
Initial protein addition to the database. This entry was referenced in Bryk and co-workers. (2017).