Knottins display a variety of biological functions


  • ‣ Some knottins are thought to perform their action via interaction with a receptor.
  • ‣ This has led several authors to use the slightly restrictive name "Inhibitor Cystine Knot" (ICK)
  • ‣ Different activities are located on different parts of the molecules, and almost all Knottin loops have been implied in one ore more function.
  • ‣ The major known biological functions exerted by Knottins are briefly outlined below.
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Analgesics

Anthelmintic

Anti-ED

Antimalarial

Antimicrobials

Antitumors

Protease inhibitors

Toxins

Insecticids

Others

Toxins

Toxic knottins inhibit ion channels, but the mechanism of inhibition remains unknown.

It has been shown that the spider toxin VSTX1 reaches its target by partitioning into the lipid membrane [Lee & MacKinnon, 2004].

Moreover, both the spider toxin GsMTx4, and its enantiomer, enGsMTx4, were shown to modify the gating of the target ion channel, ruling out the traditional lock-and-key model of ligand-protein interactions. It is hypothesized that GsMTx4 and enGsMTx4 alter the lipid packing at the bilayer/solution/channel interface [Suchyna et al., 2004; Garcia, 2004]. Molecular dynamics simulations have evidenced two modes of binding between GsMTx4 and membranes. A deep binding is favored when a DPPC (dipalmitoyl-phosphatidylcholine) membrane is used at 310 K, indicating that toxin binding with biological membranes is affected by the structure of the lipid acyl chains [Nishizawa & Nishizawa, 2007].

Further studies have shown however that bilayer partitioning is not a universal property of the toxic knottins that interact with ion channels [Posokhov et al., 2007].

More recently, the asteropsin A, an unusual cystine-crosslinked peptide from porifera, has been shown to induce neuronal Ca2+ influx when it was administered together with the Na+ channel activator veratridine [Li et al., 2013].

In 2016, a sodium channel inhibitor ISTX-I with a novel structure has been discovered and provides a new hint at the evolutionary link between two toxin folds [Rong et al., 2016].

Toxic Knottins are able to block many ion channels

exemples are shown below

 Channel  Knottin  PDB ID
 Sodium channel agonist/antagonist  delta-conotoxin TXVIA  1FU3
 mu1 sodium channel receptor  conotoxin EVIA  1G1Z
 Potassium channel blocker  kappa-conotoxin PVIIA  1AV3 1KCP
 kv4-2 Potassium channel blocker  Heteropodatoxin-2  1EMX
 Potassium channel gating modifier  Hanatoxin-1  1D1H
 Calcium channel blocker  omega-conotoxin GVIA
omega-atracotoxin HV2A
 2CCO 1G9P
 N-type calcium channel blocker  omega-conotoxin MVIIA  1MVJ 1MVI 1DW4 1I26
 L-type calcium channel blocker  omega-conotoxin TXVII  1F3K
 Calcium channel gating modifier  omega-grammotoxin SIA  1KOZ
 Sodium channel inhibitor  Neurotoxin ISTX-I  2NDI
 Sodium channel inhibitor  Conotoxin mu O-GVIIJ  2N8H